San Diego, California Talk to our team · (858) 492-0518

Molecular Services

Fragment Analysis for RFLP, ITDs and microsatellites, using capillary electrophoresis.

Discuss your project ↗

Fragment Analysis

SeqForge uses established reagents and capillary electrophoresis workflows to support your fragment analysis. Bring us your assay, expected fragment range and analysis question; our team will help you plan the next step.

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Assay-specific support

Help with planning, execution and interpreting your experiment.

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Practical sample options

Discuss your sample format and local pickup availability.

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A clear path to results

Confirm preparation requirements and reporting before you send.

Find your fit

Different questions.
The right service.

Start with what you want to learn. Our services offer complementary ways to understand your samples.

What would you like to check?

Each approach answers a different question. Compare the strengths and planning considerations below.

Help me choose →
At a glanceSanger SequencingTargeted sequence verificationWhole PlasmidNanopore SequencingLinear / AmpliconNanopore SequencingFragment AnalysisMolecular Services
Your research goalVerify an insert, a PCR product or a specific sequence region.Confirm a complete plasmid construct, including insert and backbone.Examine a longer PCR product or a defined linear DNA target.Measure fragment sizes and compare assay-specific marker patterns.
Core strengthClear base-by-base readout around a chosen primer. Useful for focused verification.Long-read context across the construct supports sequence and structural verification.Long reads help preserve sequence context across the target region.Size-based resolution for applications such as microsatellites, RFLP and ITDs.
Results to exploreChromatogram, base calls and quality information.Consensus sequence, plasmid annotation and read statistics.Consensus sequence, read-length and coverage information; analysis agreed for the project.Electropherogram with fragment sizes and signal intensities.
Plan your sampleChoose a suitable primer and clean template. Broader coverage may require additional reactions.Submit high-purity clonal plasmid DNA. A reference helps with construct comparison.Provide cleaned products, expected sizes and primer information. PCR amplification does not preserve native DNA modifications.Confirm assay design, labeling and size range. This measures fragment size rather than the full base sequence.
Start an order →Start an order →Discuss your project →Discuss your project →

Need both targeted verification and wider sequence context? Our team can help combine services. Pricing, turnaround and reporting depend on your samples and project scope.

Technology referencesCapillary electrophoresis applications ↗Whole-plasmid sequencing workflow ↗

Data & files

Explore the data behind your results.

100–360 bp

Illustrative data shown. Report content may vary by application.

Find your service.

Choose the approach that fits your sample and question.

ServiceSample / preparationApplication
RFLPAssay-dependentRestriction fragment patterns
ITDsAssay-dependentInternal tandem duplication analysis
MicrosatellitesAssay-dependentRepeat-length applications

Contact our team for current pricing, input requirements and turnaround.

Ready to send samples?

Confirm the assay, labeling, expected fragment range and sample quantity with our team before preparation.

Discuss sample requirements
01

Prepare

Confirm requirements for your service.

02

Label & send

Match sample IDs to containers and arrange delivery.

03

Review

Explore your results with application support.

Common questions

Need something more specific?

Talk to our team ↗
What can I use Fragment Analysis for?

RFLP, ITDs and microsatellites are among the applications that can be studied using capillary electrophoresis. Discuss your assay and interpretation needs with our team.

What are the submission requirements?

Requirements depend on the application. Confirm labels, concentration, volume and expected fragment sizes before sending samples.

How quickly can I get results?

Turnaround can start from next day for applicable services. Confirm timing and cutoffs for your assay and location.

Is local pickup available?

Pickup is available in select areas. Call (858) 492-0518 to confirm coverage, scheduling and packaging.

Explore Fragment Analysis and service benefits

01 / THE SERVICE

Fragment Analysis

Explore your application, then talk with our team about the right workflow for your experiment.

EXPLORE AN APPLICATION

RFLP analysis

Planning an RFLP experiment? Discuss your application and fragment analysis needs with our team.

PLAN WITH OUR TEAM

Bring your sample details and experimental goals so we can help you plan the next step.

Discuss this application

02 / FEATURES & BENEFITS

Built around your experiment.

From sample preparation to data review, practical support at every step.

01

Quality

Industry-standard reagents and workflows for accurate, reproducible results.

02

Difficult Templates

Proprietary sequencing workflows help address challenging templates. Talk with us about your sample.

03

Convenient

Local pickup is available in select areas. Confirm coverage with our team before sending.

Check pickup availability
04

Quick Turnaround

Starting from next day. Confirm timing for your application and sample submission.

05

Experienced Support

Technical support to help design, execute, and analyze your experiments.

06

Online Access

A customer portal for placing orders and retrieving data.

View customer portalContact our team to arrange Fragment Analysis. Sanger, Whole Plasmid and Oligo requests are available online.

LET’S TALK SCIENCE

Not sure where to start?

Tell us about your application. We’ll help you plan the next step.

(858) 492-0518Main / Customer supportContact our team

Illustrative preview · not a customer report

Fragment analysis report

Interactive illustrative report · 8 samples · Not a customer result